▶Yun Zuo, Jianyuan Lin, Xiangxiang Zeng, Quan Zou*, Xiangrong Liu*, CarSite-II: an integrated classification algorithm for identifying carbonylated sites based on K-means similarity-based undersampling and synthetic minority oversampling techniques, Bioinformatics, 2020, Major

▶Shuting Jin#, Xiangxiang Zeng#, Feng Xia, Wei Huang, Xiangrong Liu*,Application of Deep Learning Methods in Biological Networks, Briefings in Bioinformatics , 2020, doi: 10.1093/bib/bbaa043   (JCR一区，CCF B类，IF=5.4, Corresponding)

▶Yun Zuo, Jianyuan Lin, Quan Zou, Min Jiang*, Xiangrong Liu*, 2lpiRNApred: A 2-layer integrated algorithm for identifying piRNAs and their functional based on LFE-GM feature selection, RNA Biology, 2020, 10.1080/15476286.2020.1734382 (JCR二区， Corresponding）

▶Xiangrong Liu,Yanzi Du,Min Jiang,Xiangxiang Zeng,Multi-objective Particle Swarm Optimization Based on Network Embedding for Complex Network Community Detection, IEEE Transactions on Computational Social Systems,2020,DOI: 10.1109/TCSS.2020.2964027

▶Xiangxiang Zeng, Siyi Zhu, Xiangrong Liu, YadiZhou, Ruth Nussinov, Feixiong Cheng, deepDR: A network-based deep learning approach to in silico drug repositioning, Bioinformatics, 2019, btz418, https://doi.org/10.1093/bioinformatics/btz418 (JCR一区，CCF B类，IF=5.4)

▶Zengyan Hong, Xiangxiang Zeng*, Leyi Wei*, Xiangrong Liu*,Identifying Enhancer-Promoter Interactions with Neural Network Based on

Pre[-trained DNA Vectors and Attention Mechanism ,Bioinformatics,2019,DOI:10.1093/bioinformatics/btz694 (JCR一区，CCF B类，IF=5.4，Corresponding）

▶Francis George C. Cabarle, Ren Tristan A.de la Cruz, Dionne Peter P.，Caili pan, Defu Zhang, Xiangrong Liu*, Xiangxiang Zeng*,

Rep[resentations Of  Spiking Neural P  Systems With Rules On Synapses, Information Sciences, 2019,501:30-49, DOI: 10.1016/j.ins.2019.05.070 (JCR[一区，CCF B类，IF=4.3，Corresponding）

▶柳娟, 曹茂华,徐志达,林袁,刘向荣*, 基于选择集成学习的表面增强拉曼光谱检波算法,广州大学学报(自然科学版）, 2019,18(1):37-49

▶Kaiyang Qu, Fei Guo, Xiangrong Liu, Yuan Lin*, Quan Zou*, Application of Machine Learning in Microbiology, Frontiers in Microbiology,2019, 10: 827, (JCR二区，IF=4.02)

▶Yuan Lin#, Yinyin Cai, Juan Liu#, Chen Lin, Xiangrong Liu*, An advanced approach to identify antimicrobial peptides and their function types

[for penaeus through machine learning strategies, BMC Bioinformatics, 2019, DOI:10.1186/s12859-019-2766-9 , (JCR二区，CCF C类，IF=2.4，Corresponding)

▶Xiangrong Liu, Zengyan Hong, Juan Liu, Yuan Lin, Alfonso Rodríguez-Patón, Quan Zou*, Xiangxiang Zeng*, Computational methods for identifying the critical nodes in biological networks, Briefings in Bioinformatics, 2019, DOI: 10.1093/bib/bbz011 , (JCR一区，CCF B类，IF=6.3)

▶Cabarle FGC, de la Cruz RTA, Zhang X, Jiang M, Liu X*, Zeng X* ,On String Languages Generated by Spiking Neural P Systems with Structural Plasticity, IEEE Trans Nanobioscience. 2018,17(4):560-566. DOI: 10.1109/TNB.2018.2879345, (JCR三区，IF=2.16，Corresponding)

▶Quan Zou, Gang Lin，Xingpeng Jiang, Xiangrong Liu*, Xiangxiang Zeng*，Sequence clustering in bioinformatics: an empirical study, Briefings in Bioinformatics,2018, DOI:10.1093/bib/bby090 , (JCR一区，CCF B类，IF=6.3，Corresponding)

▶Wenying He,Ying Ju, Xiangxiang Zeng, Xiangrong Liu*, Quan Zou*, Sc-ncDNAPred: A sequence-based predictor for identifying non-coding DNA in Saccharomyces cerevisiae, Frontiers in Microbilogy, DOI: 10.3389/fmicb.2018.02174,  (JCR二区，IF=4.02，Corresponding)

▶Chen R, Liu X, Jin S, Lin J, Liu J*, Machine Learning for Drug-Target Interaction Prediction, Molecules, 2018; 23(9):220  8, (JCR三区，IF=3.0)

▶Liu B, Han L, Liu X, et al. Computational prediction of sigma-54 promoters in bacterial genomes by integrating motif finding and machine learning strategies. IEEE/ACM Transactions on Computational Biology & Bioinformatics, 2018, 99:1-1, (JCR三区，CCF B类，IF=2.4)

▶X Zeng, S Jin, J Jiang, Kh Han, Xp Min*, Xr Liu*, Predict the Relationship between Gene and Large Yellow Croaker's Economic Traits. Molecules, 2017, 22(11):1978，DOI: 10.3390/molecules22111978,  (JCR三区，IF=3.0，Corresponding)

▶Yinyin Cai, Zhijun Liao,Ying Ju, Juan Liu, Yong Mao*, Xiangrong Liu*, Resistance gene identification from Larimichthys crocea with machine learning techniques, Scientific Reports, 2016,doi:10.1038/srep38367 ,(SCI,IF=5.2, Corresponding)

▶Jing Yang,Shuoxing Jiang, Xiangrong Liu, Linqiang Pan, Cheng Zhang, Aptamer-Binding Directed DNA Origami Pattern for Logic Gates, ACS Appl. Mater. Interfaces,2016, 8, 34054−34060, DOI: 10.1021/acsami.6b102662016, (JCR一区，IF=8.1)

▶Xiangxiang Zeng, You Li, Stephen C. H. Leung, Ziyu Lin, Xiangrong Liu*, Investment Behavior Prediction in Heterogeneous Information Network, NeuroComputing, 2016,DOI:10.1016/j.neucom.2015.12.139 (JCR二区，IF=3.24, Corresponding)

▶Jiancang Zeng, Dapeng Li, Yunfeng Wu, Quan Zou, Xiangrong Liu*, An empirical  study  of  features  fusion  techniques  for  protein-protein  interaction  prediction, Current Bioinformatics,2016, DOI: 10.2174/1574893611666151119221435 (SCI，IF=0.54, Corresponding)

▶Te-Wei Chang, Xinhao Wang, Austin Hsiao, Zhida Xu, Guohong Lin, Manas Ranjan Gartia*, Xiangrong  Liu*, Gang Logan Liu*, Bifunctional Nano

Lyc[urgus Cup Array (NanoLCA) Plasmonic Sensor for Colorimetric Sensing and Surface-Enhanced Raman Spectroscopy (SERS), Advanced Optical Materials,2015, DOI: 10.1002/adom.201500092 (JCR一区, IF=7.43, Corresponding)

▶Xiangrong Liu, Juan Suo, Juan Liu, Yan Gao, Xiangxiang Zeng, Molecular  Logic Computation  with  Debugging  Method,  Journal  of  Nanomaterials,  2015, DOI:10.1155/2015/120365 (JCR三区，IF=2.21)

▶Xiangrong Liu, Ziming Li, Xiangxiang Zeng, Implementation of Arithmetic Operations with Time-free Spiking Neural P Systems, IEEE Transactions on Nanobioscience,2015, DOI:10.1109/TNB.2015.2438257. (JCR三区，IF=2.16)

▶Xiangrong Liu, Juan Suo, Stephen CH Leung, Juan Liu,  Xiangxiang Zeng, The Power of  Time-free  Tissue  P  Systems:  Attacking  NP-complete  Problems, NeuroComputing, 2015,159(151-156), DOI: 10.1016/j.neucom.2015.01.072.  (JCR二区，IF=3.24)

▶Tao Song, Quan Zou,  Xiangrong Liu, Xiangxiang Zeng, Asynchronous  Spiking Neural P  Systems  with  Rules on Synapses, NeuroComputing, 2015, 152:1439-1445. (JCR二区，IF=3.24)

▶Xuewei Zhao, Quan Zou, Bin Liu, Xiangrong Liu *，Exploratory predicting protein folding model with random forest and hybrid features. Current Proteomics, 2014, 11(4), 289-299, DOI: 10.2174/157016461104150121115154.（SCI，IF= 0.61, Corresponding）

▶Xiangrong  Liu,  Ziming  Li,  Juan  Suo  ,Juan  Liu,  Xiaoping  Min,  A  uniform  solution  to integer  factorization  using  time-free  spiking  neural  P  system,  Neural  Computing  and Applications, 2014, DOI: 10.1007/s00521-014-1799-2. (JCR三区，IF=4.21)

▶ Xiangrong  Liu,  Runquan  Xie,  Chen  Lin,  Liujuan  Cao,  Question  microblog identification  and  answer  recommendation.  Multimedia  Systems,  2014,  DOI: 10.1007/s00530-014-0411-z. (SCI，IF=1.7)

▶Sifa Xie, Wei Weng, Ke Chen, Xiangrong Liu*, Identifying Reliable Posts and Users in online Social Networks, International Journal of Pat[tern Recognition and Artificial Intelligence,2014, 28(6):1459007-1-17,DOI: 10.1142/S0218001414590071 (SCI,IF=1.0，Corresponding)

▶刘向荣, 索娟, 柳娟, 李子铭, 曾湘祥, 体内生物分子计算系统的原理、进展和展望,  中国科学院院刊,  2014,  29(1):106-114.

▶Xinhao  Wang,  Manas  Ranjan  Gartia,  Jing  Jiang,  Te-Wei  Chang,  Junle  Qian,  Yong  Liu, Xiangrong  Liu,  Gang  Logan  Liu,  Audio  Jack  Based  Miniaturized  Mobile  Phone Electrochemical  Sensing  Platform,  Sensors  and  Actuators  B: Chemical  , 2014, doi:10.1016/j.snb. (JCR一区,IF=5.667)

▶Tao  Song,  Xiangrong Liu,  Xiangxiang  Zeng,  Asynchronous  Spiking  Neural  P Systems with  Anti-Spikes,  Neural  Process  Letter,  2014,  DOI  :10.1007/ s11063-014-9378-1. (JCR三区，IF=1.787)

▶Xiangxiang  Zeng,  Lei  xu,  Xiangrong  Liu,  Linqiang  Pan,  On  Language  Generated  by Spiking  Neural  P  Systems  with  Weights,  Information  Sciences,  2014,278：423-433. (JCR一区，IF=4.3)